Microfluidic chip helps solve cellular mating puzzle

February 21, 2007 Microfluidic Chip

Johns Hopkins researchers helped invent this microfluidic chip, which features tiny channels and chambers in which they can conduct experiments on small clusters of cells. Credit: Will Kirk/JHU

Using a biochemical version of a computer chip, a team led by Johns Hopkins researchers has solved a long-standing mystery related to the mating habits of yeast cells.

The findings, described in the Feb. 18 Advance Online Publication of the journal Nature, shed new light on the way cells send and receive signals from one another and from the environment through a process called signal transduction. That process, when impaired, can lead to cancer or other illnesses.

"Yeast is a very simple single-celled organism, but in many respects it operates much like a human cell," said Andre Levchenko, an assistant professor in the Department of Biomedical Engineering at Johns Hopkins and supervisor of the research team. "That’s why it’s been studied for many years -- because what we find out in yeast often holds true for humans as well. In this study, we looked at how yeast cells signal one another when they want to merge, engaging in a type of mating behavior. Human cells ‘talk’ to one another in a similar way, and it’s important to understand this process."

Yeast cells mate by sending out pheromone designed to catch the attention of nearby cells of the opposite mating type. When a prospective partner picks up this "scent," it alters its shape and sends a projection toward the source of the pheromone, leading to a cellular merger. This mating process is regulated by proteins inside the cell called mitogen-activated protein kinases, or MAPKs, through a chain of chemical reactions.

First, sensors on the surface of a yeast cell pick up signals that a mating partner is nearby. Then the message is passed down toward the cell’s control center, the nucleus. The messengers that carry it to the nucleus are MAPKs, which direct the cell’s response by triggering multiple genes. But biologists have been baffled for years as to why two different forms of MAPKs perk up when the mating call arrives. Only one of them, called Fus3, appeared to be in charge of the courtship process, while the other was thought to be moonlighting away from its main job in another signaling pathway.

"The role of the second type of MAPK was unclear," said Saurabh Paliwal, a doctoral student in Levchenko’s lab and lead author of the Nature article. "Through experiments with a microfluidic chip and with mathematical modeling, we were able to learn that this second MAPK, called Kss1, does play a crucial role. Without it, the mating process does not proceed as smoothly."

The microfluidic chip was invented and patented by a team that included Levchenko and Paliwal, who teamed up with Alex Groisman, a physicist from the University of California, San Diego. In place of the microscopic electrical circuitry of a computer chip, their device consists of a series of tiny channels and chambers, some 20 times smaller than the diameter of human hair. Within the chip, computer-controlled fluid pressure and microscopic valves allow the researchers to isolate and conduct experiments on extremely small clusters of cells. "The level of control we can achieve on the conditions affecting just a few cells is unbelievable," Levchenko said. "This is far beyond what you can do in a traditional biology lab dish that’s filled with a large colony of cells."

Using cameras attached to a microscope, the researchers were able to view a microfluidic chip and study the mating behavior of yeast cells in response to different concentrations of pheromone in the presence or absence of Kss1. They were surprised to find that this second MAPK, thought to be relatively unimportant, actually helped the yeast cells do a better job of finding a mate through two distinct functions. First, it helped cells diversify their responses at low pheromone concentrations, so that only a small fraction of cells might engage in "expensive" mating behavior, which consumes a lot of cellular resources. Second, in the cells that were attempting to mate, Kss1 improved the precision of finding the partner.

The researchers said their findings show the importance of unraveling the role of multiple, apparently redundant proteins that are often activated by the same message passing through a cell. They also address why cells do not get confused when they are activated by multiple signaling messengers. Such findings may help produce medications with fewer side effects and others that target mutations associated with cancer.

Source: Johns Hopkins University


   
Rate this story - 4.5 /5 (8 votes)


February 21, 2007 all stories

Comments: 0

4.5 /5 (8 votes)

  • hide
  • Related Stories



Other News

Sick of blurred identity, US plant pathologists formed own society

Biology / Other

created 15 minutes ago | popularity not rated yet | comments 0

Spinach with fungus, malnourished cabbage, spots on cauliflower and peaches injured by frost. No matter the malady, a group of people who fashioned themselves as "plant doctors" assembled for the first time 100 years ago ...


First molars provide insight into evolution of great apes, humans

Biology / Evolution

created 13 hours ago | popularity 5 / 5 (1) | comments 0

The timing of molar emergence and its relation to growth and reproduction in apes is being reported by two scientists at Arizona State University's Institute of Human Origins in the Dec. 28 online early edition of the Proceedings of ...


Student sleuths using DNA reveal zoo of 95 species in NYC homes -- and new evidence of food fraud

Student sleuths using DNA reveal zoo of 95 species in NYC homes -- and new evidence of food fraud

Biology / Cell & Microbiology

created 18 hours ago | popularity 5 / 5 (9) | comments 3

Two New York City high school students exploring their homes using the latest high-tech DNA analysis techniques were astonished to discover a veritable zoo of 95 animal species surrounding them, in everything ...


Molecular chaperone keeps bacterial proteins from slow-dancing to destruction

Biology / Cell & Microbiology

created 15 hours ago | popularity 4 / 5 (1) | comments 0

Just like teenagers at a prom, proteins are tended by chaperones whose job it is to prevent unwanted interactions among immature clients. And at the molecular level, just as at the high school gym level, it's a job that usually ...


Simplest bacteria unravelled at the cellular level

Biology / Cell & Microbiology

created 13 hours ago | popularity 5 / 5 (2) | comments 0

Even the simplest cell appears to be far more complex than researchers had imagined. In a series of three articles in the journal Science, researchers including Vera van Noort at the European Molecular Biology Laboratory (EMBL) ...